Header left.png

Difference between revisions of "Lmod"

From Systems Group
Jump to: navigation, search
(Created page with "Lmod is a Lua-based module system. Environment Modules provide a convenient way to dynamically change the users' environment through modulefiles. == Commands == Display mod...")
 
(Commands)
Line 6: Line 6:
  
 
  module avail
 
  module avail
 +
 +
example:
  
Display default set of modules loaded by the system.
+
module avail
 +
------------------------------------------------------ /opt/modulefiles/Linux ------------------------------------------------------
 +
  R/4.0.3            pandas/1.3.5  (D)    pytorch/1.4        (D)    selene-sdk/0.1.3          tensorflow/2.4
 +
  cython/0.28.5      perl/5.30            pyyaml/3.12        (D)    selene-sdk/0.4            tensorflow/2.5
 +
  deepcpg/1.0.7      pyfasta/0.5.2        pyyaml/5.1.1              selene-sdk/0.4.1  (D)    tensorflow/2.7  (D)
 +
  docopt/0.6.0        python/3.7.3        pyyaml/5.1.2              sratoolkit/2.9.6-1        xgboost/0.7post4
 +
  keras/2.2.4        python/3.7.4        samtools/1.9              tensorflow/1.13.1
 +
  miniconda/4.11.0    python/3.8.12 (D)    scikit-learn/0.22.2        tensorflow/1.14.0
 +
  pandas/0.25.1      pytorch/1.1.0        scikit-learn/1.0.2  (D)    tensorflow/2.1
  
module list
 
  
 
Load package.
 
Load package.
Line 16: Line 25:
 
   
 
   
 
  example:
 
  example:
 +
 
  module load miniconda
 
  module load miniconda
  
Line 23: Line 33:
 
   
 
   
 
  example:
 
  example:
 +
 
  module unload miniconda
 
  module unload miniconda

Revision as of 18:03, 21 April 2022

Lmod is a Lua-based module system. Environment Modules provide a convenient way to dynamically change the users' environment through modulefiles.

Commands

Display modules available for users to load.

module avail

example:
module avail
------------------------------------------------------ /opt/modulefiles/Linux ------------------------------------------------------
  R/4.0.3             pandas/1.3.5  (D)    pytorch/1.4         (D)    selene-sdk/0.1.3          tensorflow/2.4
  cython/0.28.5       perl/5.30            pyyaml/3.12         (D)    selene-sdk/0.4            tensorflow/2.5
  deepcpg/1.0.7       pyfasta/0.5.2        pyyaml/5.1.1               selene-sdk/0.4.1   (D)    tensorflow/2.7   (D)
  docopt/0.6.0        python/3.7.3         pyyaml/5.1.2               sratoolkit/2.9.6-1        xgboost/0.7post4
  keras/2.2.4         python/3.7.4         samtools/1.9               tensorflow/1.13.1
  miniconda/4.11.0    python/3.8.12 (D)    scikit-learn/0.22.2        tensorflow/1.14.0
  pandas/0.25.1       pytorch/1.1.0        scikit-learn/1.0.2  (D)    tensorflow/2.1


Load package.

module load packagename

example:
module load miniconda

Unload package.

module unload packagename

example:
module unload miniconda