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Difference between revisions of "Lmod"

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(Commands)
(Commands)
Line 10: Line 10:
 
  module avail
 
  module avail
 
  ------------------------------------------------------ /opt/modulefiles/Linux ------------------------------------------------------
 
  ------------------------------------------------------ /opt/modulefiles/Linux ------------------------------------------------------
   R/4.0.3            pandas/1.3.5 (D)    pytorch/1.4         (D)    selene-sdk/0.1.3         tensorflow/2.4
+
   R/4.0.3            pandas/1.3.5         pytorch/1.4               selene-sdk/0.1.3         
  cython/0.28.5      perl/5.30            pyyaml/3.12         (D)    selene-sdk/0.4            tensorflow/2.5
+
   deepcpg/1.0.7      pyfasta/0.5.2        pyyaml/5.1.1              selene-sdk/0.4.1          
   deepcpg/1.0.7      pyfasta/0.5.2        pyyaml/5.1.1              selene-sdk/0.4.1   (D)    tensorflow/2.7  (D)
+
  docopt/0.6.0        python/3.7.3        pyyaml/5.1.2              sratoolkit/2.9.6-1        xgboost/0.7post4
+
 
   keras/2.2.4        python/3.7.4        samtools/1.9              tensorflow/1.13.1
 
   keras/2.2.4        python/3.7.4        samtools/1.9              tensorflow/1.13.1
   miniconda/4.11.0   python/3.8.12 (D)    scikit-learn/0.22.2        tensorflow/1.14.0
+
   miniconda/4.11.0  
  pandas/0.25.1      pytorch/1.1.0        scikit-learn/1.0.2  (D)    tensorflow/2.1
+
  
  

Revision as of 18:04, 21 April 2022

Lmod is a Lua-based module system. Environment Modules provide a convenient way to dynamically change the users' environment through modulefiles.

Commands

Display modules available for users to load.

module avail

example:
module avail
------------------------------------------------------ /opt/modulefiles/Linux ------------------------------------------------------
  R/4.0.3             pandas/1.3.5         pytorch/1.4                selene-sdk/0.1.3         
  deepcpg/1.0.7       pyfasta/0.5.2        pyyaml/5.1.1               selene-sdk/0.4.1           
  keras/2.2.4         python/3.7.4         samtools/1.9               tensorflow/1.13.1
  miniconda/4.11.0   


Load package.

module load packagename

example:
module load miniconda

Unload package.

module unload packagename

example:
module unload miniconda