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Difference between revisions of "Lmod"

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(Commands)
(Commands)
Line 7: Line 7:
 
  module avail
 
  module avail
  
example:
+
example:
 
  module avail
 
  module avail
 
  ------------------------------------------------------ /path/to/modulefiles ------------------------------------------------------
 
  ------------------------------------------------------ /path/to/modulefiles ------------------------------------------------------
Line 20: Line 20:
 
  module load ''packagename/x.x.x''
 
  module load ''packagename/x.x.x''
  
  example:
+
  example
 
  module load miniconda                      #loads default package when version is not specified
 
  module load miniconda                      #loads default package when version is not specified
 
  module load selene-sdk/0.4.1              #load a specific module
 
  module load selene-sdk/0.4.1              #load a specific module
Line 30: Line 30:
 
  module unload ''packagename''
 
  module unload ''packagename''
  
example:
+
example
 
  module unload miniconda                    #unload single package
 
  module unload miniconda                    #unload single package
 
  module unload python/3.8.12 tensorflow/2.1 #unload multiple packages  
 
  module unload python/3.8.12 tensorflow/2.1 #unload multiple packages  
Line 39: Line 39:
 
  module list
 
  module list
  
example:
+
example
 
  module list
 
  module list
 
  Currently Loaded Modules:
 
  Currently Loaded Modules:
 
  1) python/3.8.12  2) tensorflow/2.1
 
  1) python/3.8.12  2) tensorflow/2.1

Revision as of 18:28, 21 April 2022

Lmod is a Lua-based module system. Environment Modules provide a convenient way to dynamically change the users' environment through modulefiles.

Commands

Display modules available for users to load.

module avail

example:

module avail
------------------------------------------------------ /path/to/modulefiles ------------------------------------------------------
  R/4.0.3                pandas/1.3.5         pytorch/1.4                selene-sdk/0.1.3         
  deepcpg/1.0.7          pyfasta/0.5.2        pyyaml/5.1.1               selene-sdk/0.4.1           
  keras/2.2.4            python/3.7.4         samtools/1.9               tensorflow/1.13.1
  miniconda/4.11.0  (D) 


Load package.

module load packagename/x.x.x
example
module load miniconda                      #loads default package when version is not specified
module load selene-sdk/0.4.1               #load a specific module
module load python/3.8.12 tensorflow/2.1   #load multiple packages


Unload package.

module unload packagename

example

module unload miniconda                    #unload single package
module unload python/3.8.12 tensorflow/2.1 #unload multiple packages 


Display currently loaded modules.

module list

example

module list
Currently Loaded Modules:
1) python/3.8.12   2) tensorflow/2.1